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中华移植杂志(电子版) ›› 2025, Vol. 19 ›› Issue (02) : 99 -104. doi: 10.3877/cma.j.issn.1674-3903.2025.02.005

论著

人全血细环病毒荧光定量PCR检测方法的构建及临床评估
张涛, 罗锐, 丁晨鑫, 叶啟发, 王彦峰, 周鑫()   
  1. 430071 武汉,武汉大学中南医院 武汉大学肝胆疾病研究院 武汉大学移植医学中心 国家人体捐献器官获取质量控制中心 移植医学技术湖北省重点实验室 湖北省天然高分子生物肝临床医学研究中心 湖北省天然高分子基医用材料构建工程技术研究中心
  • 收稿日期:2024-07-24 出版日期:2025-04-25
  • 通信作者: 周鑫
  • 基金资助:
    国家自然科学基金面上项目(82270793)

Construction and clinical evaluation of a fluorescence quantitative PCR detection method for torque teno virus in human blood

Tao Zhang, Rui Luo, Chenxin Ding, Qifa Ye, Yanfeng Wang, Xin Zhou()   

  1. Zhongnan Hospital of Wuhan University, Institute of Hepatobiliary Diseases of Wuhan University, Transplant Medicine Center of Wuhan University, National Quality Control Center for Human Donated Organ Procurement, Hubei Key Laboratory of Transplant Medicine Technology, Hubei Clinical Research Center for Natural Polymer Bio-liver, Hubei Engineering Research Center for Natural Polymer-based Medical Materials Construction, Wuhan 430071, China
  • Received:2024-07-24 Published:2025-04-25
  • Corresponding author: Xin Zhou
引用本文:

张涛, 罗锐, 丁晨鑫, 叶啟发, 王彦峰, 周鑫. 人全血细环病毒荧光定量PCR检测方法的构建及临床评估[J/OL]. 中华移植杂志(电子版), 2025, 19(02): 99-104.

Tao Zhang, Rui Luo, Chenxin Ding, Qifa Ye, Yanfeng Wang, Xin Zhou. Construction and clinical evaluation of a fluorescence quantitative PCR detection method for torque teno virus in human blood[J/OL]. Chinese Journal of Transplantation(Electronic Edition), 2025, 19(02): 99-104.

目的

构建人全血细环病毒(TTV)的荧光定量PCR(qPCR)检测方法,并评价其在肾移植受者免疫功能评估中的作用。

方法

根据美国国家生物信息中心数据库中公布的TTV标准核酸序列,针对非翻译区设计引物及探针,人工合成该区域序列并整合进质粒中作为检测标准品。对退火温度、引物浓度和探针浓度进行反应条件优化,建立TTV qPCR检测的标准曲线。收集武汉大学移植医学中心108例肾移植受者和等待肾移植患者临床血液样本,根据临床状态分为稳定组、感染组、排斥组和等待移植组,进行TTV载量检测,并通过受试者操作特征(ROC)曲线评估TTV拷贝数对肾移植术后感染和排斥反应的诊断价值。

结果

最终确定qPCR优化条件为退火温度56 ℃,引物和探针加入量均为1 μL。根据优化后的qPCR反应条件,以1×109~1×103 copies/μL的标准品为模板进行qPCR检测生成标准曲线,决定系数为0.999,斜率为-3.320,截距为42.28,扩增效率为100.1%,最低可检测1×101 copies/μL病毒载量的样品。通过对108例患者血浆样本进行优化条件下的qPCR检测发现,TTV载量与感染或排斥反应的发生相关。稳定组受者TTV载量为5.125(4.550,5.491) log copies/μL,感染组TTV载量升高,为5.888(5.135,6.506) log copies/μL;排斥组TTV载量降低,为4.167(3.459~4.869)log copies/μL;移植前组TTV载量最低,为2.885(2.636,3.233) log copies/μL,差异均有统计学意义(P<0.05)。TTV载量诊断排斥反应的ROC曲线下面积为0.7875(P<0.05),约登指数最大时截断值为4.999 log copies/μL;TTV载量诊断感染的ROC曲线下面积为0.7458(P<0.05),约登指数最大时截断值为5.770 log copies/μL。

结论

本研究构建的TTV qPCR检测具有良好的敏感度和特异度,可以用于人全血TTV的检测。当TTV载量低于9.98×104 copies/μL时,发生排斥反应的风险较大;当TTV载量高于5.89×105 copies/μL时,发生感染的风险较大。

Objective

To establish a fluorescence quantitative PCR (qPCR) assay for detecting Torque teno virus (TTV) in human blood and evaluate its role in assessing immune function in kidney transplant recipients.

Methods

Based on the TTV standard nucleic acid sequence published in the NCBI (the national center for biotechnology information) database, primers and probes were designed for the UTR region.This region was artificially synthesized and integrated into a plasmid as a detection standard. Reaction conditions, including annealing temperature, primer concentration, and probe concentration, were optimized to establish a standard curve for TTV qPCR detection. Clinical blood samples from 108 kidney transplant recipients and candidates awaiting transplantation were collected from the Transplant Medicine Center of Wuhan University and divided into stable, rejection, pre-transplant, and infection groups based on clinical status. TTV load was measured, and the diagnostic value of TTV copy number for post-transplant infection and rejection was evaluated using receiver operating characteristic (ROC) curve analysis.

Results

The optimized qPCR conditions were determined as an annealing temperature of 56 ℃, with 1 μL each of primers and probes. Under these conditions, a standard curve was generated using standard templates ranging from 9 to 3 log copies/μL, yielding a coefficient of determination R2=0.999, slope=-3.320, intercept=42.28, amplification efficiency=100.1%, and a lower detection limit of 1 log copies/μL. qPCR testing of 108 patient plasma samples revealed correlations between TTV load and infection or rejection. The TTV load in the stable group was 5.125 (4.550, 5.491) log copies/μL, increased in the infection group to 5.888 (5.135, 6.506) log copies/μL, decreased in the rejection group to 4.167 (3.459-4.869) log copies/μL, and was lowest in the pre-transplant group at 2.885 (2.636, 3.233) log copies/μL, with statistically significant differences (P<0.05). The area under the ROC curve (AUC) for TTV load in diagnosing rejection was 0.7875 (P<0.05), with an optimal cutoff value of 4.999 log copies/μL at the maximum Youden index. For diagnosing infection, the AUC was 0.7458 (P<0.05), with an optimal cutoff value of 5.770 log copies/μL.

Conclusions

The established TTV qPCR assay demonstrates good sensitivity and specificity for detecting TTV in human whole blood. A TTV load below 9.98×104 copies/μL indicates a higher risk of rejection, while a load above 5.89×105 copies/μL suggests a higher risk of infection.

图1 TTV质粒载体电泳图注:TTV.细环病毒;Lane M: DNA Marker; Lane 1:经Ndel限制性内切酶消化后的TTV3-pMD18T载体质粒;Lane 2:未经Ndel限制性内切酶消化的TTV3-pMD18T载体质粒
表1 TTV3荧光定量PCR检测引物及探针序列
表2 TTV3荧光定量PCR反应体系退火温度优化(扩增循环数)
表3 TTV3荧光定量PCR反应体系引物和探针加入量优化(扩增循环数)
图2 TTV荧光定量PCR扩增和标准曲线注:a.扩增曲线;b.标准曲线;TTV.细环病毒;RFU.相对荧光单位;CT.循环阈值;E9、E8、E7、E6、E5、E4和E3分别为1×109、1×108、1×107、1×106、1×105、1×104和1×103 copies/μL标准品
表4 108例肾移植受者和等待移植患者一般资料
图3 TTV载量诊断肾移植术后排斥反应和感染发生风险的ROC曲线注:TTV.细环病毒;ROC曲线.受试者操作特征曲线;a和b分别为TTV载量诊断肾移植术后排斥反应和感染发生风险的ROC曲线
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